Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.93■■□□□ 1.1
COL15A1P39059 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC21.93■■□□□ 1.1
COL15A1P39059 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
COL15A1P39059 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC21.93■■□□□ 1.1
COL15A1P39059 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 RPL28-209ENST00000560055 670 ntTSL 3 BASIC21.93■■□□□ 1.1
COL15A1P39059 AC093520.2-201ENST00000561830 333 ntBASIC21.93■■□□□ 1.1
COL15A1P39059 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.93■■□□□ 1.1
COL15A1P39059 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 LINC01451-201ENST00000623792 534 ntBASIC21.93■■□□□ 1.1
COL15A1P39059 LINC00628-201ENST00000628516 1289 ntBASIC21.93■■□□□ 1.1
COL15A1P39059 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
COL15A1P39059 AC046185.3-201ENST00000623228 1824 ntBASIC21.93■■□□□ 1.1
COL15A1P39059 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.93■■□□□ 1.1
COL15A1P39059 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.93■■□□□ 1.1
COL15A1P39059 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
COL15A1P39059 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.93■■□□□ 1.1
COL15A1P39059 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL15A1P39059 STX6-204ENST00000542060 4809 ntTSL 2 BASIC21.93■■□□□ 1.1
COL15A1P39059 AC008764.6-201ENST00000595909 2069 ntBASIC21.92■■□□□ 1.1
COL15A1P39059 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
COL15A1P39059 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.92■■□□□ 1.1
COL15A1P39059 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
COL15A1P39059 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.92■■□□□ 1.1
COL15A1P39059 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.92■■□□□ 1.1
COL15A1P39059 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.92■■□□□ 1.1
COL15A1P39059 AL355306.1-201ENST00000415580 579 ntBASIC21.92■■□□□ 1.1
COL15A1P39059 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.92■■□□□ 1.1
COL15A1P39059 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC21.92■■□□□ 1.1
COL15A1P39059 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.92■■□□□ 1.1
COL15A1P39059 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
COL15A1P39059 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL15A1P39059 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
COL15A1P39059 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL15A1P39059 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL15A1P39059 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.91■■□□□ 1.1
COL15A1P39059 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 AL627223.1-201ENST00000416693 442 ntBASIC21.91■■□□□ 1.1
COL15A1P39059 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC21.91■■□□□ 1.1
COL15A1P39059 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
COL15A1P39059 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
COL15A1P39059 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC21.91■■□□□ 1.1
COL15A1P39059 AC025678.2-201ENST00000562061 970 ntBASIC21.91■■□□□ 1.1
COL15A1P39059 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
COL15A1P39059 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC21.91■■□□□ 1.1
COL15A1P39059 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC21.91■■□□□ 1.1
COL15A1P39059 AC007613.1-201ENST00000572811 2597 ntBASIC21.91■■□□□ 1.1
COL15A1P39059 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC21.91■■□□□ 1.1
COL15A1P39059 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
COL15A1P39059 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
COL15A1P39059 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.91■■□□□ 1.1
COL15A1P39059 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.91■■□□□ 1.1
COL15A1P39059 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.91■■□□□ 1.1
COL15A1P39059 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL15A1P39059 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 TIMM8BP1-201ENST00000452384 211 ntBASIC21.9■■□□□ 1.1
COL15A1P39059 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.9■■□□□ 1.1
COL15A1P39059 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.9■■□□□ 1.1
COL15A1P39059 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.9■■□□□ 1.1
COL15A1P39059 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.9■■□□□ 1.1
COL15A1P39059 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
COL15A1P39059 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
COL15A1P39059 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms