Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.67■□□□□ 0.1
SOX6P35712 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.67■□□□□ 0.1
SOX6P35712 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX6P35712 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC15.67■□□□□ 0.1
SOX6P35712 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SOX6P35712 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SOX6P35712 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SOX6P35712 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SOX6P35712 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SOX6P35712 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.66■□□□□ 0.1
SOX6P35712 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC15.66■□□□□ 0.1
SOX6P35712 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 AC116353.5-201ENST00000638148 1699 ntBASIC15.66■□□□□ 0.1
SOX6P35712 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SOX6P35712 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SOX6P35712 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
SOX6P35712 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.65■□□□□ 0.1
SOX6P35712 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SOX6P35712 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SOX6P35712 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SOX6P35712 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC15.65■□□□□ 0.1
SOX6P35712 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
SOX6P35712 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.65■□□□□ 0.1
SOX6P35712 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC15.65■□□□□ 0.1
SOX6P35712 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.65■□□□□ 0.1
SOX6P35712 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
SOX6P35712 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.65■□□□□ 0.1
SOX6P35712 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SOX6P35712 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.65■□□□□ 0.1
SOX6P35712 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms