Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP4AP20648 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP4AP20648 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.28■□□□□ 0.68
ATP4AP20648 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.28■□□□□ 0.68
ATP4AP20648 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
ATP4AP20648 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP4AP20648 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.28■□□□□ 0.68
ATP4AP20648 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.28■□□□□ 0.68
ATP4AP20648 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ATP4AP20648 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP4AP20648 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP4AP20648 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP4AP20648 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP4AP20648 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
ATP4AP20648 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 AC134043.2-201ENST00000624206 2238 ntBASIC19.27■□□□□ 0.68
ATP4AP20648 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 AP002414.1-201ENST00000391405 1147 ntBASIC19.27■□□□□ 0.68
ATP4AP20648 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ATP4AP20648 HCG4B-203ENST00000450128 991 ntBASIC19.27■□□□□ 0.68
ATP4AP20648 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP4AP20648 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP4AP20648 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP4AP20648 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
ATP4AP20648 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP4AP20648 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
ATP4AP20648 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP4AP20648 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP4AP20648 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
ATP4AP20648 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ATP4AP20648 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.27■□□□□ 0.67
ATP4AP20648 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP4AP20648 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP4AP20648 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP4AP20648 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ATP4AP20648 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.27■□□□□ 0.67
ATP4AP20648 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP4AP20648 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP4AP20648 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP4AP20648 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP4AP20648 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP4AP20648 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP4AP20648 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP4AP20648 VN2R19P-201ENST00000442399 1052 ntBASIC19.26■□□□□ 0.67
ATP4AP20648 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 AC092865.5-201ENST00000545435 363 ntBASIC19.26■□□□□ 0.67
ATP4AP20648 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP4AP20648 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP4AP20648 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATP4AP20648 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATP4AP20648 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP4AP20648 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP4AP20648 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP4AP20648 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP4AP20648 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ATP4AP20648 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATP4AP20648 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP4AP20648 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.25■□□□□ 0.67
ATP4AP20648 IGLL3P-201ENST00000412472 434 ntBASIC19.25■□□□□ 0.67
ATP4AP20648 RNA5SP416-201ENST00000516838 111 ntBASIC19.25■□□□□ 0.67
ATP4AP20648 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
ATP4AP20648 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP4AP20648 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP4AP20648 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ATP4AP20648 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP4AP20648 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP4AP20648 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms