Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.28■□□□□ 0.52
RARAP10276 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.28■□□□□ 0.52
RARAP10276 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.28■□□□□ 0.52
RARAP10276 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.28■□□□□ 0.52
RARAP10276 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RARAP10276 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
RARAP10276 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.28■□□□□ 0.52
RARAP10276 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.28■□□□□ 0.52
RARAP10276 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.28■□□□□ 0.52
RARAP10276 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 DRAXINP1-201ENST00000437611 948 ntBASIC18.28■□□□□ 0.52
RARAP10276 AC122714.2-201ENST00000502787 707 ntBASIC18.28■□□□□ 0.52
RARAP10276 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.28■□□□□ 0.52
RARAP10276 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.28■□□□□ 0.52
RARAP10276 AP002414.4-201ENST00000589764 1148 ntBASIC18.28■□□□□ 0.52
RARAP10276 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.28■□□□□ 0.52
RARAP10276 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.28■□□□□ 0.52
RARAP10276 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
RARAP10276 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.28■□□□□ 0.52
RARAP10276 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
RARAP10276 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.28■□□□□ 0.52
RARAP10276 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.28■□□□□ 0.52
RARAP10276 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
RARAP10276 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
RARAP10276 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RARAP10276 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.27■□□□□ 0.52
RARAP10276 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RARAP10276 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
RARAP10276 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.27■□□□□ 0.52
RARAP10276 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
RARAP10276 VENTXP7-201ENST00000475503 772 ntBASIC18.27■□□□□ 0.52
RARAP10276 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC18.27■□□□□ 0.52
RARAP10276 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.27■□□□□ 0.52
RARAP10276 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.27■□□□□ 0.52
RARAP10276 AC109462.3-201ENST00000573934 613 ntBASIC18.27■□□□□ 0.52
RARAP10276 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
RARAP10276 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 AC010331.1-201ENST00000611423 582 ntBASIC18.27■□□□□ 0.52
RARAP10276 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
RARAP10276 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RARAP10276 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.27■□□□□ 0.51
RARAP10276 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RARAP10276 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RARAP10276 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.27■□□□□ 0.51
RARAP10276 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RARAP10276 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.27■□□□□ 0.51
RARAP10276 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RARAP10276 AC011270.2-201ENST00000624293 2550 ntBASIC18.27■□□□□ 0.51
RARAP10276 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RARAP10276 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
RARAP10276 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RARAP10276 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 AL049757.1-201ENST00000616842 1596 ntBASIC18.26■□□□□ 0.51
RARAP10276 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
RARAP10276 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.26■□□□□ 0.51
RARAP10276 AC008894.3-201ENST00000624324 3103 ntBASIC18.26■□□□□ 0.51
RARAP10276 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RARAP10276 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.26■□□□□ 0.51
RARAP10276 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.26■□□□□ 0.51
RARAP10276 FAM220CP-201ENST00000395253 831 ntBASIC18.26■□□□□ 0.51
RARAP10276 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RARAP10276 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.26■□□□□ 0.51
RARAP10276 TOB2P1-201ENST00000469761 992 ntBASIC18.26■□□□□ 0.51
RARAP10276 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC18.26■□□□□ 0.51
RARAP10276 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.26■□□□□ 0.51
RARAP10276 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.26■□□□□ 0.51
RARAP10276 AC009533.2-201ENST00000543664 586 ntBASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms