Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CGB3P0DN86 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.28□□□□□ -0.12
CGB3P0DN86 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CGB3P0DN86 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.28□□□□□ -0.12
CGB3P0DN86 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.28□□□□□ -0.12
CGB3P0DN86 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.28□□□□□ -0.12
CGB3P0DN86 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CGB3P0DN86 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CGB3P0DN86 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CGB3P0DN86 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CGB3P0DN86 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CGB3P0DN86 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CGB3P0DN86 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
CGB3P0DN86 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
CGB3P0DN86 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.27□□□□□ -0.12
CGB3P0DN86 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.27□□□□□ -0.12
CGB3P0DN86 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CGB3P0DN86 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CGB3P0DN86 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CGB3P0DN86 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CGB3P0DN86 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CGB3P0DN86 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
CGB3P0DN86 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
CGB3P0DN86 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CGB3P0DN86 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CGB3P0DN86 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CGB3P0DN86 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 ACTG1P4-201ENST00000425123 1122 ntBASIC14.27□□□□□ -0.13
CGB3P0DN86 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.27□□□□□ -0.13
CGB3P0DN86 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.27□□□□□ -0.13
CGB3P0DN86 AC124947.2-201ENST00000547118 1133 ntBASIC14.27□□□□□ -0.13
CGB3P0DN86 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.27□□□□□ -0.13
CGB3P0DN86 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.27□□□□□ -0.13
CGB3P0DN86 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.27□□□□□ -0.13
CGB3P0DN86 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.27□□□□□ -0.13
CGB3P0DN86 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.27□□□□□ -0.13
CGB3P0DN86 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CGB3P0DN86 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CGB3P0DN86 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.27□□□□□ -0.13
CGB3P0DN86 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
CGB3P0DN86 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
CGB3P0DN86 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.26□□□□□ -0.13
CGB3P0DN86 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.26□□□□□ -0.13
CGB3P0DN86 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 AC060834.1-201ENST00000443027 2032 ntBASIC14.26□□□□□ -0.13
CGB3P0DN86 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 AC092053.1-201ENST00000605787 1936 ntBASIC14.26□□□□□ -0.13
CGB3P0DN86 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CGB3P0DN86 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.26□□□□□ -0.13
CGB3P0DN86 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 KRT18P31-201ENST00000506277 1292 ntBASIC14.26□□□□□ -0.13
CGB3P0DN86 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC14.26□□□□□ -0.13
CGB3P0DN86 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.26□□□□□ -0.13
CGB3P0DN86 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.26□□□□□ -0.13
CGB3P0DN86 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.26□□□□□ -0.13
CGB3P0DN86 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CGB3P0DN86 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CGB3P0DN86 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms