Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC15.31■□□□□ 0.04
UBCP0CG48 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBCP0CG48 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 BX664615.1-201ENST00000443558 458 ntBASIC15.31■□□□□ 0.04
UBCP0CG48 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.31■□□□□ 0.04
UBCP0CG48 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.31■□□□□ 0.04
UBCP0CG48 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
UBCP0CG48 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.31■□□□□ 0.04
UBCP0CG48 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
UBCP0CG48 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.31■□□□□ 0.04
UBCP0CG48 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
UBCP0CG48 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.31■□□□□ 0.04
UBCP0CG48 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.3■□□□□ 0.04
UBCP0CG48 MYCLP1-201ENST00000372451 1075 ntBASIC15.3■□□□□ 0.04
UBCP0CG48 MIR662-201ENST00000384847 95 ntBASIC15.3■□□□□ 0.04
UBCP0CG48 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
UBCP0CG48 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 AL596275.1-201ENST00000423464 877 ntBASIC15.3■□□□□ 0.04
UBCP0CG48 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.3■□□□□ 0.04
UBCP0CG48 AC068472.1-201ENST00000474589 881 ntBASIC15.3■□□□□ 0.04
UBCP0CG48 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.3■□□□□ 0.04
UBCP0CG48 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 ADM-208ENST00000534464 1640 ntTSL 2 BASIC15.3■□□□□ 0.04
UBCP0CG48 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.3■□□□□ 0.04
UBCP0CG48 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.3■□□□□ 0.04
UBCP0CG48 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.3■□□□□ 0.04
UBCP0CG48 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
UBCP0CG48 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
UBCP0CG48 NFIC-211ENST00000641145 8399 ntBASIC15.3■□□□□ 0.04
UBCP0CG48 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
UBCP0CG48 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
UBCP0CG48 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
UBCP0CG48 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.29■□□□□ 0.04
UBCP0CG48 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.29■□□□□ 0.04
UBCP0CG48 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
UBCP0CG48 AC113347.1-201ENST00000413321 391 ntBASIC15.29■□□□□ 0.04
UBCP0CG48 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.29■□□□□ 0.04
UBCP0CG48 AL359075.1-203ENST00000462729 1002 ntBASIC15.29■□□□□ 0.04
UBCP0CG48 YBX1P2-201ENST00000489612 999 ntBASIC15.29■□□□□ 0.04
UBCP0CG48 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC15.29■□□□□ 0.04
UBCP0CG48 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.29■□□□□ 0.04
UBCP0CG48 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.29■□□□□ 0.04
UBCP0CG48 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.29■□□□□ 0.04
UBCP0CG48 AC011558.1-201ENST00000623459 338 ntBASIC15.29■□□□□ 0.04
UBCP0CG48 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
UBCP0CG48 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
UBCP0CG48 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms