Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TUBB4AP04350 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TUBB4AP04350 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
TUBB4AP04350 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBB4AP04350 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TUBB4AP04350 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TUBB4AP04350 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBB4AP04350 AC002558.1-201ENST00000488906 803 ntBASIC18.68■□□□□ 0.58
TUBB4AP04350 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBB4AP04350 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.68■□□□□ 0.58
TUBB4AP04350 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBB4AP04350 SLC25A1P4-201ENST00000567977 778 ntBASIC18.68■□□□□ 0.58
TUBB4AP04350 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TUBB4AP04350 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TUBB4AP04350 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
TUBB4AP04350 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TUBB4AP04350 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.68■□□□□ 0.58
TUBB4AP04350 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBB4AP04350 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.68■□□□□ 0.58
TUBB4AP04350 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TUBB4AP04350 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TUBB4AP04350 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TUBB4AP04350 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBB4AP04350 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.67■□□□□ 0.58
TUBB4AP04350 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.67■□□□□ 0.58
TUBB4AP04350 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBB4AP04350 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBB4AP04350 AC233263.1-201ENST00000578059 224 ntBASIC18.67■□□□□ 0.58
TUBB4AP04350 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.67■□□□□ 0.58
TUBB4AP04350 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBB4AP04350 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBB4AP04350 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TUBB4AP04350 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
TUBB4AP04350 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TUBB4AP04350 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.67■□□□□ 0.58
TUBB4AP04350 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TUBB4AP04350 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TUBB4AP04350 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB4AP04350 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB4AP04350 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.66■□□□□ 0.58
TUBB4AP04350 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB4AP04350 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
TUBB4AP04350 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBB4AP04350 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.66■□□□□ 0.58
TUBB4AP04350 AC006538.1-201ENST00000567905 1585 ntBASIC18.66■□□□□ 0.58
TUBB4AP04350 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 LINC00554-201ENST00000564841 3011 ntBASIC18.66■□□□□ 0.58
TUBB4AP04350 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB4AP04350 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB4AP04350 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TUBB4AP04350 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB4AP04350 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.66■□□□□ 0.58
TUBB4AP04350 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TUBB4AP04350 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms