Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PDGFAP04085 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PDGFAP04085 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PDGFAP04085 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.3■□□□□ 0.2
PDGFAP04085 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.3■□□□□ 0.2
PDGFAP04085 AP006288.1-201ENST00000446065 395 ntBASIC16.3■□□□□ 0.2
PDGFAP04085 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
PDGFAP04085 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.3■□□□□ 0.2
PDGFAP04085 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.3■□□□□ 0.2
PDGFAP04085 MIR1199-201ENST00000621445 119 ntBASIC16.3■□□□□ 0.2
PDGFAP04085 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.3■□□□□ 0.2
PDGFAP04085 AC073592.4-201ENST00000623827 446 ntBASIC16.3■□□□□ 0.2
PDGFAP04085 AC005593.1-201ENST00000624894 515 ntBASIC16.3■□□□□ 0.2
PDGFAP04085 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.3■□□□□ 0.2
PDGFAP04085 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.3■□□□□ 0.2
PDGFAP04085 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.3■□□□□ 0.2
PDGFAP04085 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PDGFAP04085 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.3■□□□□ 0.2
PDGFAP04085 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PDGFAP04085 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDGFAP04085 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFAP04085 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFAP04085 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFAP04085 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 KRT18P28-201ENST00000453838 1332 ntBASIC16.29■□□□□ 0.2
PDGFAP04085 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PDGFAP04085 AC097374.2-201ENST00000618617 1306 ntBASIC16.29■□□□□ 0.2
PDGFAP04085 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
PDGFAP04085 MST1L-201ENST00000442552 2185 ntBASIC16.29■□□□□ 0.2
PDGFAP04085 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFAP04085 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PDGFAP04085 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFAP04085 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFAP04085 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.29■□□□□ 0.2
PDGFAP04085 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFAP04085 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
PDGFAP04085 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFAP04085 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.29■□□□□ 0.2
PDGFAP04085 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.29■□□□□ 0.2
PDGFAP04085 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
PDGFAP04085 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.29■□□□□ 0.2
PDGFAP04085 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PDGFAP04085 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDGFAP04085 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PDGFAP04085 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.28■□□□□ 0.2
PDGFAP04085 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.28■□□□□ 0.2
PDGFAP04085 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PDGFAP04085 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
PDGFAP04085 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PDGFAP04085 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.28■□□□□ 0.2
PDGFAP04085 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFAP04085 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.28■□□□□ 0.2
PDGFAP04085 ALG1L5P-201ENST00000482043 771 ntBASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms