Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
SGCEO43556 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
SGCEO43556 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 HARS-201ENST00000307633 1780 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 AC125634.1-201ENST00000438758 1403 ntBASIC15.44■□□□□ 0.06
SGCEO43556 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCEO43556 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.44■□□□□ 0.06
SGCEO43556 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
SGCEO43556 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SGCEO43556 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 COX5BP2-201ENST00000392354 334 ntBASIC15.44■□□□□ 0.06
SGCEO43556 AL845331.1-201ENST00000424978 1190 ntBASIC15.44■□□□□ 0.06
SGCEO43556 AC005104.2-201ENST00000427818 678 ntBASIC15.44■□□□□ 0.06
SGCEO43556 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCEO43556 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCEO43556 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCEO43556 AC005336.2-201ENST00000593183 939 ntBASIC15.44■□□□□ 0.06
SGCEO43556 AL445228.2-201ENST00000605589 952 ntBASIC15.44■□□□□ 0.06
SGCEO43556 AC091076.1-201ENST00000610741 619 ntBASIC15.44■□□□□ 0.06
SGCEO43556 AC010331.1-201ENST00000611423 582 ntBASIC15.44■□□□□ 0.06
SGCEO43556 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCEO43556 AL358472.4-201ENST00000633140 710 ntBASIC15.44■□□□□ 0.06
SGCEO43556 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.44■□□□□ 0.06
SGCEO43556 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
SGCEO43556 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SGCEO43556 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.44■□□□□ 0.06
SGCEO43556 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SGCEO43556 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 AC007967.3-201ENST00000434308 558 ntBASIC15.43■□□□□ 0.06
SGCEO43556 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.43■□□□□ 0.06
SGCEO43556 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 AL138831.2-201ENST00000606564 490 ntBASIC15.43■□□□□ 0.06
SGCEO43556 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.43■□□□□ 0.06
SGCEO43556 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC15.43■□□□□ 0.06
SGCEO43556 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
SGCEO43556 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SGCEO43556 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
SGCEO43556 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.43■□□□□ 0.06
SGCEO43556 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.43■□□□□ 0.06
SGCEO43556 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.43■□□□□ 0.06
SGCEO43556 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.43■□□□□ 0.06
SGCEO43556 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.43■□□□□ 0.06
SGCEO43556 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SGCEO43556 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
SGCEO43556 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
SGCEO43556 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.42■□□□□ 0.06
SGCEO43556 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SGCEO43556 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms