Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC008406.3-201ENST00000620001 1374 ntBASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 APTR-203ENST00000430801 583 ntTSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NME6-213ENST00000451657 871 ntTSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC009065.1-201ENST00000564055 1225 ntBASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC004264.1-201ENST00000608354 794 ntBASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AL365203.3-201ENST00000609742 2057 ntBASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC11.05□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 Z85996.1-201ENST00000494644 937 ntBASIC11.04□□□□□ -0.64
TMEM256-PLSCR3K7ERE1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC11.04□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms