Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.4■□□□□ 0.06
NPIPB4C9JG80 AL591684.3-201ENST00000605187 298 ntBASIC15.4■□□□□ 0.06
NPIPB4C9JG80 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NPIPB4C9JG80 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 NUS1P2-201ENST00000417358 873 ntBASIC15.39■□□□□ 0.05
NPIPB4C9JG80 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 AC106795.1-205ENST00000512851 1056 ntBASIC15.39■□□□□ 0.05
NPIPB4C9JG80 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 OR6D1P-202ENST00000641007 5290 ntBASIC15.39■□□□□ 0.05
NPIPB4C9JG80 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 AC148477.5-201ENST00000625164 1645 ntBASIC15.39■□□□□ 0.05
NPIPB4C9JG80 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC15.39■□□□□ 0.05
NPIPB4C9JG80 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 AC022211.2-201ENST00000585075 2527 ntBASIC15.38■□□□□ 0.05
NPIPB4C9JG80 AP005117.1-201ENST00000584346 1413 ntBASIC15.38■□□□□ 0.05
NPIPB4C9JG80 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 RBM17P3-201ENST00000417687 1192 ntBASIC15.38■□□□□ 0.05
NPIPB4C9JG80 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NPIPB4C9JG80 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
NPIPB4C9JG80 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms