Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 RNU1-129P-201ENST00000384064 167 ntBASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 MEIS3P1-201ENST00000495167 958 ntBASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 U1.21-201ENST00000580816 167 ntBASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 AL031055.1-201ENST00000606362 631 ntBASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 AC109635.5-201ENST00000533593 962 ntBASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 AL138781.2-201ENST00000617896 1843 ntBASIC26.02■■□□□ 1.76
CDC42BPBQ9Y5S2 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 AC005034.1-201ENST00000426657 489 ntBASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 TNXA-203ENST00000507684 2038 ntBASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 LINC02560-201ENST00000596379 459 ntBASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
CDC42BPBQ9Y5S2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC26■■□□□ 1.75
CDC42BPBQ9Y5S2 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 AC004890.2-204ENST00000481968 304 ntBASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 TERF1P3-201ENST00000505638 1227 ntBASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 ALG1L8P-201ENST00000533887 760 ntBASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC25.99■■□□□ 1.75
CDC42BPBQ9Y5S2 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 AP000842.3-202ENST00000569238 1080 ntBASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CDC42BPBQ9Y5S2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC25.98■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms