Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
AP4S1Q9Y587 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 CR769767.2-201ENST00000622735 460 ntBASIC16.52■□□□□ 0.24
AP4S1Q9Y587 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.52■□□□□ 0.24
AP4S1Q9Y587 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
AP4S1Q9Y587 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 AL355355.2-201ENST00000442321 338 ntBASIC16.51■□□□□ 0.23
AP4S1Q9Y587 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 AC142086.2-201ENST00000569753 217 ntBASIC16.51■□□□□ 0.23
AP4S1Q9Y587 RN7SL471P-201ENST00000580476 299 ntBASIC16.51■□□□□ 0.23
AP4S1Q9Y587 AC010240.3-201ENST00000607688 395 ntBASIC16.51■□□□□ 0.23
AP4S1Q9Y587 DGCR10-201ENST00000609839 495 ntBASIC16.51■□□□□ 0.23
AP4S1Q9Y587 AL109923.1-201ENST00000618799 583 ntBASIC16.51■□□□□ 0.23
AP4S1Q9Y587 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
AP4S1Q9Y587 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
AP4S1Q9Y587 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms