Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SLC52A1Q9NWF4 AL035252.4-201ENST00000624174 288 ntBASIC24.72■■□□□ 1.55
SLC52A1Q9NWF4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SLC52A1Q9NWF4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
SLC52A1Q9NWF4 HLA-DQB1-201ENST00000374943 1656 ntBASIC24.72■■□□□ 1.55
SLC52A1Q9NWF4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SLC52A1Q9NWF4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 AC008677.1-201ENST00000519230 1561 ntBASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SLC52A1Q9NWF4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC24.7■■□□□ 1.55
SLC52A1Q9NWF4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.55
SLC52A1Q9NWF4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.55
SLC52A1Q9NWF4 FO538757.1-201ENST00000623083 1397 ntBASIC24.7■■□□□ 1.55
SLC52A1Q9NWF4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 SPDYE7P-202ENST00000420373 878 ntBASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 AC005034.1-201ENST00000426657 489 ntBASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 CCDC74BP1-201ENST00000508880 1123 ntBASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 IGHV3-62-201ENST00000520057 340 ntBASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 AL158211.3-201ENST00000607385 239 ntBASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SLC52A1Q9NWF4 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 AC005225.4-201ENST00000557330 545 ntBASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 AC012645.4-201ENST00000610691 1061 ntBASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SLC52A1Q9NWF4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 AC012569.1-201ENST00000591191 1524 ntBASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 AP000974.1-201ENST00000623909 2387 ntBASIC24.68■■□□□ 1.54
SLC52A1Q9NWF4 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms