Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 MRPL20P1-201ENST00000400819 433 ntBASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 AC091812.2-201ENST00000619081 385 ntBASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 AL805961.1-202ENST00000641562 540 ntBASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 NOC2LP2-201ENST00000407594 1944 ntBASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
PDLIM7Q9NR12 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 AC003669.1-201ENST00000334569 611 ntBASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 IGHV3-52-201ENST00000519770 353 ntBASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 MIR4745-201ENST00000577608 62 ntBASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 AC007613.1-201ENST00000572811 2597 ntBASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PDLIM7Q9NR12 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 AC004461.1-201ENST00000412461 403 ntBASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 RHOQP3-201ENST00000437982 621 ntBASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 AC074386.1-202ENST00000463561 864 ntBASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PDLIM7Q9NR12 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
PDLIM7Q9NR12 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PDLIM7Q9NR12 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PDLIM7Q9NR12 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 MYCLP1-201ENST00000372451 1075 ntBASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC19.39■□□□□ 0.69
PDLIM7Q9NR12 TAF8-206ENST00000472818 719 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 457.2 ms