Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SH2D4AQ9H788 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH2D4AQ9H788 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SH2D4AQ9H788 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH2D4AQ9H788 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH2D4AQ9H788 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SH2D4AQ9H788 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 HCG4B-203ENST00000450128 991 ntBASIC20.28■□□□□ 0.84
SH2D4AQ9H788 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SH2D4AQ9H788 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 LINC01451-201ENST00000623792 534 ntBASIC20.27■□□□□ 0.84
SH2D4AQ9H788 AC079781.4-201ENST00000641908 219 ntBASIC20.27■□□□□ 0.84
SH2D4AQ9H788 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SH2D4AQ9H788 AC046185.3-201ENST00000623228 1824 ntBASIC20.27■□□□□ 0.84
SH2D4AQ9H788 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
SH2D4AQ9H788 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
SH2D4AQ9H788 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SH2D4AQ9H788 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SH2D4AQ9H788 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SH2D4AQ9H788 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.27■□□□□ 0.83
SH2D4AQ9H788 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
SH2D4AQ9H788 HR-201ENST00000312841 5351 ntTSL 5 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 PCDHB18P-201ENST00000524813 2368 ntBASIC20.26■□□□□ 0.83
SH2D4AQ9H788 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 MCCD1P2-201ENST00000423228 335 ntBASIC20.26■□□□□ 0.83
SH2D4AQ9H788 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 KRT18P2-201ENST00000447938 1258 ntBASIC20.26■□□□□ 0.83
SH2D4AQ9H788 AC112482.1-201ENST00000492080 688 ntBASIC20.26■□□□□ 0.83
SH2D4AQ9H788 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.26■□□□□ 0.83
SH2D4AQ9H788 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms