Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 HLA-J-203ENST00000494367 1087 ntBASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 AC096734.2-201ENST00000562054 433 ntBASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 PDPK2P-202ENST00000562415 1191 ntBASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 AC239800.4-201ENST00000603712 296 ntBASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 AC010507.1-201ENST00000633895 436 ntBASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 AC097637.2-201ENST00000624096 1997 ntBASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 AC018470.1-201ENST00000624790 3129 ntBASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SYNGAP1Q96PV0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.77■□□□□ 0.75
SYNGAP1Q96PV0 KRT18P55-202ENST00000578578 1546 ntBASIC19.77■□□□□ 0.75
SYNGAP1Q96PV0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SYNGAP1Q96PV0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
SYNGAP1Q96PV0 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
SYNGAP1Q96PV0 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
SYNGAP1Q96PV0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
SYNGAP1Q96PV0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SYNGAP1Q96PV0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 PTCHD3P3-201ENST00000403073 906 ntBASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 AL078644.1-201ENST00000609881 752 ntBASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 ABALON-201ENST00000629058 1903 ntBASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 MYCLP1-201ENST00000372451 1075 ntBASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 CNN2P11-201ENST00000429351 262 ntBASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SYNGAP1Q96PV0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 NOC2LP2-201ENST00000407594 1944 ntBASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 LINC00982-205ENST00000420957 435 ntBASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 RHOQP3-201ENST00000437982 621 ntBASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 OR7E47P-204ENST00000575924 449 ntBASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SYNGAP1Q96PV0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SYNGAP1Q96PV0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms