Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.64■□□□□ 0.25
ITCHQ96J02 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.64■□□□□ 0.25
ITCHQ96J02 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ITCHQ96J02 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ITCHQ96J02 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ITCHQ96J02 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.63■□□□□ 0.25
ITCHQ96J02 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.63■□□□□ 0.25
ITCHQ96J02 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
ITCHQ96J02 MIR662-201ENST00000384847 95 ntBASIC16.63■□□□□ 0.25
ITCHQ96J02 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 AL596275.1-201ENST00000423464 877 ntBASIC16.63■□□□□ 0.25
ITCHQ96J02 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.63■□□□□ 0.25
ITCHQ96J02 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 AC011558.1-201ENST00000623459 338 ntBASIC16.63■□□□□ 0.25
ITCHQ96J02 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ITCHQ96J02 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ITCHQ96J02 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ITCHQ96J02 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.63■□□□□ 0.25
ITCHQ96J02 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ITCHQ96J02 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.63■□□□□ 0.25
ITCHQ96J02 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
ITCHQ96J02 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ITCHQ96J02 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.62■□□□□ 0.25
ITCHQ96J02 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.62■□□□□ 0.25
ITCHQ96J02 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
ITCHQ96J02 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
ITCHQ96J02 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.62■□□□□ 0.25
ITCHQ96J02 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ITCHQ96J02 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.62■□□□□ 0.25
ITCHQ96J02 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.62■□□□□ 0.25
ITCHQ96J02 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 BX664615.1-201ENST00000443558 458 ntBASIC16.62■□□□□ 0.25
ITCHQ96J02 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.62■□□□□ 0.25
ITCHQ96J02 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.62■□□□□ 0.25
ITCHQ96J02 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.62■□□□□ 0.25
ITCHQ96J02 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
ITCHQ96J02 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ITCHQ96J02 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 AC097374.2-201ENST00000618617 1306 ntBASIC16.62■□□□□ 0.25
ITCHQ96J02 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
ITCHQ96J02 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ITCHQ96J02 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ITCHQ96J02 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.61■□□□□ 0.25
ITCHQ96J02 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.61■□□□□ 0.25
ITCHQ96J02 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.61■□□□□ 0.25
ITCHQ96J02 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ITCHQ96J02 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.61■□□□□ 0.25
ITCHQ96J02 COX5BP2-201ENST00000392354 334 ntBASIC16.61■□□□□ 0.25
ITCHQ96J02 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.61■□□□□ 0.25
ITCHQ96J02 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.61■□□□□ 0.25
ITCHQ96J02 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.61■□□□□ 0.25
ITCHQ96J02 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.61■□□□□ 0.25
ITCHQ96J02 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.61■□□□□ 0.25
ITCHQ96J02 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.61■□□□□ 0.25
ITCHQ96J02 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms