Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 FAM220CP-201ENST00000395253 831 ntBASIC16.84■□□□□ 0.29
RNF31Q96EP0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 AC093677.2-201ENST00000600169 1863 ntBASIC16.84■□□□□ 0.29
RNF31Q96EP0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RNF31Q96EP0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF31Q96EP0 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RNF31Q96EP0 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.83■□□□□ 0.29
RNF31Q96EP0 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF31Q96EP0 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF31Q96EP0 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.83■□□□□ 0.28
RNF31Q96EP0 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 RNA5SP415-201ENST00000517246 115 ntBASIC16.83■□□□□ 0.28
RNF31Q96EP0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 AC140113.2-201ENST00000604370 208 ntBASIC16.83■□□□□ 0.28
RNF31Q96EP0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RNF31Q96EP0 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF31Q96EP0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 HLA-J-201ENST00000462773 1622 ntBASIC16.82■□□□□ 0.28
RNF31Q96EP0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 AL356488.2-201ENST00000602755 427 ntBASIC16.82■□□□□ 0.28
RNF31Q96EP0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF31Q96EP0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RNF31Q96EP0 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms