Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 CXCL1P1-201ENST00000502804 216 ntBASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 AL513210.1-201ENST00000629608 234 ntBASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 AC105339.1-204ENST00000636249 355 ntBASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TMEFF1Q8IYR6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TMEFF1Q8IYR6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEFF1Q8IYR6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TMEFF1Q8IYR6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.27■□□□□ 0.35
TMEFF1Q8IYR6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.27■□□□□ 0.35
TMEFF1Q8IYR6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEFF1Q8IYR6 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEFF1Q8IYR6 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEFF1Q8IYR6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 AC068137.2-201ENST00000605408 478 ntBASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEFF1Q8IYR6 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 AC093677.2-201ENST00000600169 1863 ntBASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 DDX43P3-201ENST00000441064 443 ntBASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TMEFF1Q8IYR6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 BCRP1-201ENST00000444246 691 ntBASIC17.24■□□□□ 0.35
TMEFF1Q8IYR6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms