Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 MIR3197-201ENST00000582241 73 ntBASIC19.94■□□□□ 0.78
SH3RF1Q7Z6J0 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC19.94■□□□□ 0.78
SH3RF1Q7Z6J0 AC107918.4-202ENST00000641623 219 ntBASIC19.94■□□□□ 0.78
SH3RF1Q7Z6J0 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF1Q7Z6J0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
SH3RF1Q7Z6J0 AL023806.1-201ENST00000603994 1649 ntBASIC19.94■□□□□ 0.78
SH3RF1Q7Z6J0 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
SH3RF1Q7Z6J0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 AC080080.1-201ENST00000625121 2420 ntBASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 CROCCP2-202ENST00000412962 2773 ntBASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SH3RF1Q7Z6J0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 CRCP-205ENST00000431089 942 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 AL139288.1-201ENST00000623748 933 ntBASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SH3RF1Q7Z6J0 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 AP006288.1-201ENST00000446065 395 ntBASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 MTDHP5-201ENST00000598980 586 ntBASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.91■□□□□ 0.78
SH3RF1Q7Z6J0 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms