Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 SLC25A1P3-201ENST00000395415 828 ntBASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 DDX43P3-201ENST00000441064 443 ntBASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ERCC6LQ2NKX8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 LINC01311-201ENST00000565162 1445 ntBASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 MTDHP1-201ENST00000605323 784 ntBASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 LINC00167-201ENST00000530583 1419 ntBASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ERCC6LQ2NKX8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 KRT8P9-201ENST00000558927 1449 ntBASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ERCC6LQ2NKX8 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 RNA5SP413-201ENST00000516373 109 ntBASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
ERCC6LQ2NKX8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms