Protein–RNA interactions for Protein: P62491

RAB11A, Ras-related protein Rab-11A, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11AP62491 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.24□□□□□ -0.13
RAB11AP62491 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RAB11AP62491 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RAB11AP62491 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RAB11AP62491 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC14.24□□□□□ -0.13
RAB11AP62491 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RAB11AP62491 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.23□□□□□ -0.13
RAB11AP62491 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC14.23□□□□□ -0.13
RAB11AP62491 CD99P1-205ENST00000527459 561 ntBASIC14.23□□□□□ -0.13
RAB11AP62491 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 REEP1-209ENST00000541910 969 ntTSL 2 BASIC14.23□□□□□ -0.13
RAB11AP62491 AC116562.4-202ENST00000641738 218 ntBASIC14.23□□□□□ -0.13
RAB11AP62491 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RAB11AP62491 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RAB11AP62491 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
RAB11AP62491 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB11AP62491 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB11AP62491 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 ABHD17AP1-201ENST00000358206 933 ntBASIC14.22□□□□□ -0.13
RAB11AP62491 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 RPS2P55-201ENST00000397318 883 ntBASIC14.22□□□□□ -0.13
RAB11AP62491 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
RAB11AP62491 AC107956.1-201ENST00000494359 873 ntBASIC14.22□□□□□ -0.13
RAB11AP62491 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RAB11AP62491 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
RAB11AP62491 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB11AP62491 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.22□□□□□ -0.13
RAB11AP62491 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
RAB11AP62491 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
RAB11AP62491 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.22□□□□□ -0.13
RAB11AP62491 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms