Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.56■□□□□ 0.88
CACNB3P54284 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CACNB3P54284 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.56■□□□□ 0.88
CACNB3P54284 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CACNB3P54284 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNB3P54284 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
CACNB3P54284 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
CACNB3P54284 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.55■□□□□ 0.88
CACNB3P54284 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.55■□□□□ 0.88
CACNB3P54284 NABP1-203ENST00000409510 843 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNB3P54284 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC20.55■□□□□ 0.88
CACNB3P54284 PAWRP1-201ENST00000451083 565 ntBASIC20.55■□□□□ 0.88
CACNB3P54284 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.55■□□□□ 0.88
CACNB3P54284 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.55■□□□□ 0.88
CACNB3P54284 AC105339.1-204ENST00000636249 355 ntBASIC20.55■□□□□ 0.88
CACNB3P54284 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.55■□□□□ 0.88
CACNB3P54284 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CACNB3P54284 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNB3P54284 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.55■□□□□ 0.88
CACNB3P54284 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.55■□□□□ 0.88
CACNB3P54284 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CACNB3P54284 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CACNB3P54284 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
CACNB3P54284 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
CACNB3P54284 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CACNB3P54284 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.54■□□□□ 0.88
CACNB3P54284 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.54■□□□□ 0.88
CACNB3P54284 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CACNB3P54284 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.54■□□□□ 0.88
CACNB3P54284 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CACNB3P54284 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 ACTG1P14-201ENST00000446382 1122 ntBASIC20.54■□□□□ 0.88
CACNB3P54284 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CACNB3P54284 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.54■□□□□ 0.88
CACNB3P54284 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.54■□□□□ 0.88
CACNB3P54284 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.54■□□□□ 0.88
CACNB3P54284 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.54■□□□□ 0.88
CACNB3P54284 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CACNB3P54284 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC20.53■□□□□ 0.88
CACNB3P54284 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.53■□□□□ 0.88
CACNB3P54284 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNB3P54284 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
CACNB3P54284 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNB3P54284 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CACNB3P54284 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC20.53■□□□□ 0.88
CACNB3P54284 AC087163.2-201ENST00000457299 853 ntBASIC20.53■□□□□ 0.88
CACNB3P54284 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CACNB3P54284 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.53■□□□□ 0.88
CACNB3P54284 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
CACNB3P54284 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.53■□□□□ 0.88
CACNB3P54284 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC20.53■□□□□ 0.88
CACNB3P54284 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CACNB3P54284 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNB3P54284 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.53■□□□□ 0.88
CACNB3P54284 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNB3P54284 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CACNB3P54284 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CACNB3P54284 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CACNB3P54284 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.52■□□□□ 0.88
CACNB3P54284 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
CACNB3P54284 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC20.52■□□□□ 0.88
CACNB3P54284 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.52■□□□□ 0.88
CACNB3P54284 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.52■□□□□ 0.88
CACNB3P54284 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.52■□□□□ 0.88
CACNB3P54284 AC022145.2-201ENST00000598203 171 ntBASIC20.52■□□□□ 0.88
CACNB3P54284 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CACNB3P54284 AL139327.4-201ENST00000612362 153 ntBASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms