Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
EFNA3P52797 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNA3P52797 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
EFNA3P52797 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNA3P52797 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 MIR574-201ENST00000385209 96 ntBASIC16.33■□□□□ 0.2
EFNA3P52797 RPL13AP23-201ENST00000480739 586 ntBASIC16.33■□□□□ 0.2
EFNA3P52797 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.33■□□□□ 0.2
EFNA3P52797 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.33■□□□□ 0.2
EFNA3P52797 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.33■□□□□ 0.2
EFNA3P52797 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.33■□□□□ 0.2
EFNA3P52797 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.33■□□□□ 0.2
EFNA3P52797 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNA3P52797 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.33■□□□□ 0.2
EFNA3P52797 AC105339.3-201ENST00000560043 636 ntBASIC16.33■□□□□ 0.2
EFNA3P52797 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.33■□□□□ 0.2
EFNA3P52797 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.33■□□□□ 0.2
EFNA3P52797 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 AC004706.3-202ENST00000621574 984 ntBASIC16.33■□□□□ 0.2
EFNA3P52797 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.33■□□□□ 0.2
EFNA3P52797 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.33■□□□□ 0.2
EFNA3P52797 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNA3P52797 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.33■□□□□ 0.2
EFNA3P52797 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
EFNA3P52797 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EFNA3P52797 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.32■□□□□ 0.2
EFNA3P52797 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.32■□□□□ 0.2
EFNA3P52797 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.32■□□□□ 0.2
EFNA3P52797 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 NOC2LP2-201ENST00000407594 1944 ntBASIC16.32■□□□□ 0.2
EFNA3P52797 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.32■□□□□ 0.2
EFNA3P52797 SIGLEC30P-201ENST00000455569 941 ntBASIC16.32■□□□□ 0.2
EFNA3P52797 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.32■□□□□ 0.2
EFNA3P52797 AC093909.1-201ENST00000504731 1122 ntBASIC16.32■□□□□ 0.2
EFNA3P52797 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.32■□□□□ 0.2
EFNA3P52797 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.32■□□□□ 0.2
EFNA3P52797 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.32■□□□□ 0.2
EFNA3P52797 AC034105.1-201ENST00000563488 319 ntBASIC16.32■□□□□ 0.2
EFNA3P52797 AC106730.1-201ENST00000566722 1090 ntBASIC16.32■□□□□ 0.2
EFNA3P52797 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.32■□□□□ 0.2
EFNA3P52797 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
EFNA3P52797 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
EFNA3P52797 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
EFNA3P52797 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
EFNA3P52797 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNA3P52797 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EFNA3P52797 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNA3P52797 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNA3P52797 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNA3P52797 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
EFNA3P52797 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNA3P52797 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
EFNA3P52797 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.31■□□□□ 0.2
EFNA3P52797 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNA3P52797 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNA3P52797 RNA5SP415-201ENST00000517246 115 ntBASIC16.31■□□□□ 0.2
EFNA3P52797 AC145285.3-201ENST00000564603 959 ntBASIC16.31■□□□□ 0.2
EFNA3P52797 AL589182.2-201ENST00000619332 1049 ntBASIC16.31■□□□□ 0.2
EFNA3P52797 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
EFNA3P52797 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.31■□□□□ 0.2
EFNA3P52797 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
EFNA3P52797 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
EFNA3P52797 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.31■□□□□ 0.2
EFNA3P52797 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms