Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 OR6D1P-203ENST00000641209 4860 ntBASIC15.83■□□□□ 0.12
GDF1P27539 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 AP002414.3-201ENST00000589352 1468 ntBASIC15.83■□□□□ 0.12
GDF1P27539 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.83■□□□□ 0.12
GDF1P27539 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
GDF1P27539 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
GDF1P27539 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.83■□□□□ 0.12
GDF1P27539 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.82■□□□□ 0.12
GDF1P27539 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
GDF1P27539 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.82■□□□□ 0.12
GDF1P27539 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.82■□□□□ 0.12
GDF1P27539 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
GDF1P27539 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 RPL13AP23-201ENST00000480739 586 ntBASIC15.82■□□□□ 0.12
GDF1P27539 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.82■□□□□ 0.12
GDF1P27539 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.82■□□□□ 0.12
GDF1P27539 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.82■□□□□ 0.12
GDF1P27539 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.82■□□□□ 0.12
GDF1P27539 AF228730.7-201ENST00000641842 219 ntBASIC15.82■□□□□ 0.12
GDF1P27539 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
GDF1P27539 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
GDF1P27539 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
GDF1P27539 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GDF1P27539 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
GDF1P27539 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
GDF1P27539 AC097637.2-201ENST00000624096 1997 ntBASIC15.82■□□□□ 0.12
GDF1P27539 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GDF1P27539 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.81■□□□□ 0.12
GDF1P27539 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
GDF1P27539 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.81■□□□□ 0.12
GDF1P27539 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.81■□□□□ 0.12
GDF1P27539 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.81■□□□□ 0.12
GDF1P27539 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.81■□□□□ 0.12
GDF1P27539 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
GDF1P27539 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.81■□□□□ 0.12
GDF1P27539 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.81■□□□□ 0.12
GDF1P27539 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.81■□□□□ 0.12
GDF1P27539 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.81■□□□□ 0.12
GDF1P27539 AC006116.8-202ENST00000587620 1550 ntBASIC15.81■□□□□ 0.12
GDF1P27539 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 AL356488.2-201ENST00000602755 427 ntBASIC15.81■□□□□ 0.12
GDF1P27539 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
GDF1P27539 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
GDF1P27539 EML3-217ENST00000531557 2509 ntTSL 5 BASIC15.81■□□□□ 0.12
GDF1P27539 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GDF1P27539 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.8■□□□□ 0.12
GDF1P27539 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.8■□□□□ 0.12
GDF1P27539 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
GDF1P27539 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.8■□□□□ 0.12
GDF1P27539 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GDF1P27539 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms