Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.38■□□□□ 0.21
CCL4P13236 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL4P13236 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL4P13236 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL4P13236 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL4P13236 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.38■□□□□ 0.21
CCL4P13236 ACTL9-202ENST00000612068 1252 ntBASIC16.38■□□□□ 0.21
CCL4P13236 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CCL4P13236 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.38■□□□□ 0.21
CCL4P13236 AC006116.8-202ENST00000587620 1550 ntBASIC16.38■□□□□ 0.21
CCL4P13236 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CCL4P13236 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL4P13236 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL4P13236 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
CCL4P13236 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL4P13236 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL4P13236 AC004461.1-201ENST00000412461 403 ntBASIC16.37■□□□□ 0.21
CCL4P13236 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 PAWRP1-201ENST00000451083 565 ntBASIC16.37■□□□□ 0.21
CCL4P13236 SLC25A6P2-201ENST00000497974 877 ntBASIC16.37■□□□□ 0.21
CCL4P13236 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.37■□□□□ 0.21
CCL4P13236 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.37■□□□□ 0.21
CCL4P13236 AC004835.2-201ENST00000603762 682 ntBASIC16.37■□□□□ 0.21
CCL4P13236 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 AL513210.1-201ENST00000629608 234 ntBASIC16.37■□□□□ 0.21
CCL4P13236 AC105339.1-204ENST00000636249 355 ntBASIC16.37■□□□□ 0.21
CCL4P13236 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL4P13236 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL4P13236 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CCL4P13236 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.37■□□□□ 0.21
CCL4P13236 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.37■□□□□ 0.21
CCL4P13236 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.37■□□□□ 0.21
CCL4P13236 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CCL4P13236 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CCL4P13236 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CCL4P13236 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL4P13236 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL4P13236 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL4P13236 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL4P13236 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL4P13236 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCL4P13236 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CCL4P13236 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.36■□□□□ 0.21
CCL4P13236 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
CCL4P13236 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.36■□□□□ 0.21
CCL4P13236 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.36■□□□□ 0.21
CCL4P13236 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.36■□□□□ 0.21
CCL4P13236 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 AL139327.4-201ENST00000612362 153 ntBASIC16.36■□□□□ 0.21
CCL4P13236 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCL4P13236 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CCL4P13236 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CCL4P13236 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CCL4P13236 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
CCL4P13236 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.36■□□□□ 0.21
CCL4P13236 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCL4P13236 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
CCL4P13236 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CCL4P13236 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
CCL4P13236 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CCL4P13236 AC087163.2-201ENST00000457299 853 ntBASIC16.35■□□□□ 0.21
CCL4P13236 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CCL4P13236 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms