Protein–RNA interactions for Protein: O43915

VEGFD, Vascular endothelial growth factor D, humanhuman

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFDO43915 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.1■□□□□ 0.33
VEGFDO43915 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VEGFDO43915 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.1■□□□□ 0.33
VEGFDO43915 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
VEGFDO43915 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VEGFDO43915 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VEGFDO43915 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VEGFDO43915 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VEGFDO43915 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VEGFDO43915 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VEGFDO43915 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VEGFDO43915 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.1■□□□□ 0.33
VEGFDO43915 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VEGFDO43915 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
VEGFDO43915 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
VEGFDO43915 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.09■□□□□ 0.33
VEGFDO43915 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 AC079776.4-201ENST00000511039 504 ntBASIC17.09■□□□□ 0.33
VEGFDO43915 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.09■□□□□ 0.33
VEGFDO43915 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.09■□□□□ 0.33
VEGFDO43915 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC17.09■□□□□ 0.33
VEGFDO43915 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.09■□□□□ 0.33
VEGFDO43915 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.09■□□□□ 0.33
VEGFDO43915 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
VEGFDO43915 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.09■□□□□ 0.33
VEGFDO43915 AL353135.1-201ENST00000606729 504 ntBASIC17.09■□□□□ 0.33
VEGFDO43915 PGM5P2-202ENST00000637225 1043 ntBASIC17.09■□□□□ 0.33
VEGFDO43915 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VEGFDO43915 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
VEGFDO43915 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
VEGFDO43915 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.09■□□□□ 0.33
VEGFDO43915 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
VEGFDO43915 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VEGFDO43915 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VEGFDO43915 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
VEGFDO43915 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.08■□□□□ 0.33
VEGFDO43915 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
VEGFDO43915 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
VEGFDO43915 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.08■□□□□ 0.32
VEGFDO43915 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VEGFDO43915 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.08■□□□□ 0.32
VEGFDO43915 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.08■□□□□ 0.32
VEGFDO43915 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.08■□□□□ 0.32
VEGFDO43915 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.08■□□□□ 0.32
VEGFDO43915 MIR1199-201ENST00000621445 119 ntBASIC17.08■□□□□ 0.32
VEGFDO43915 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
VEGFDO43915 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
VEGFDO43915 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
VEGFDO43915 OR6D1P-202ENST00000641007 5290 ntBASIC17.08■□□□□ 0.32
VEGFDO43915 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VEGFDO43915 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VEGFDO43915 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VEGFDO43915 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
VEGFDO43915 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.08■□□□□ 0.32
VEGFDO43915 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.08■□□□□ 0.32
VEGFDO43915 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.07■□□□□ 0.32
VEGFDO43915 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.07■□□□□ 0.32
VEGFDO43915 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.07■□□□□ 0.32
VEGFDO43915 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.07■□□□□ 0.32
VEGFDO43915 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.07■□□□□ 0.32
VEGFDO43915 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.07■□□□□ 0.32
VEGFDO43915 AC012640.2-201ENST00000561606 901 ntBASIC17.07■□□□□ 0.32
VEGFDO43915 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
VEGFDO43915 AL049840.3-201ENST00000602669 611 ntBASIC17.07■□□□□ 0.32
VEGFDO43915 AC116407.3-201ENST00000623905 1129 ntBASIC17.07■□□□□ 0.32
VEGFDO43915 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.07■□□□□ 0.32
VEGFDO43915 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
VEGFDO43915 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
VEGFDO43915 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
VEGFDO43915 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms