Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.61■□□□□ 0.25
CASQ2O14958 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.61■□□□□ 0.25
CASQ2O14958 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CASQ2O14958 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.61■□□□□ 0.25
CASQ2O14958 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.61■□□□□ 0.25
CASQ2O14958 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.61■□□□□ 0.25
CASQ2O14958 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CASQ2O14958 AC024909.3-201ENST00000611513 2257 ntBASIC16.61■□□□□ 0.25
CASQ2O14958 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CASQ2O14958 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CASQ2O14958 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.6■□□□□ 0.25
CASQ2O14958 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.6■□□□□ 0.25
CASQ2O14958 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.6■□□□□ 0.25
CASQ2O14958 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CASQ2O14958 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.6■□□□□ 0.25
CASQ2O14958 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.6■□□□□ 0.25
CASQ2O14958 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.6■□□□□ 0.25
CASQ2O14958 AC009949.1-201ENST00000623048 1830 ntBASIC16.6■□□□□ 0.25
CASQ2O14958 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CASQ2O14958 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CASQ2O14958 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.6■□□□□ 0.25
CASQ2O14958 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.6■□□□□ 0.25
CASQ2O14958 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CASQ2O14958 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.59■□□□□ 0.25
CASQ2O14958 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
CASQ2O14958 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CASQ2O14958 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.59■□□□□ 0.25
CASQ2O14958 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 POM121L13P-201ENST00000422362 380 ntBASIC16.59■□□□□ 0.25
CASQ2O14958 UNC93B4-201ENST00000505679 747 ntBASIC16.59■□□□□ 0.25
CASQ2O14958 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 RARRES2P10-201ENST00000564312 460 ntBASIC16.59■□□□□ 0.25
CASQ2O14958 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.59■□□□□ 0.25
CASQ2O14958 AC116407.2-201ENST00000613639 860 ntBASIC16.59■□□□□ 0.25
CASQ2O14958 AL050303.2-201ENST00000619798 666 ntBASIC16.59■□□□□ 0.25
CASQ2O14958 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.59■□□□□ 0.25
CASQ2O14958 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.59■□□□□ 0.25
CASQ2O14958 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CASQ2O14958 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CASQ2O14958 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.59■□□□□ 0.25
CASQ2O14958 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASQ2O14958 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASQ2O14958 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASQ2O14958 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASQ2O14958 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.58■□□□□ 0.25
CASQ2O14958 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASQ2O14958 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CASQ2O14958 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CASQ2O14958 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CASQ2O14958 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASQ2O14958 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASQ2O14958 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms