Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AC040169.1-201ENST00000565382 521 ntBASIC18.81■□□□□ 0.6
NXF3Q9H4D5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.81■□□□□ 0.6
NXF3Q9H4D5 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.81■□□□□ 0.6
NXF3Q9H4D5 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
NXF3Q9H4D5 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
NXF3Q9H4D5 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.81■□□□□ 0.6
NXF3Q9H4D5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
NXF3Q9H4D5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.81■□□□□ 0.6
NXF3Q9H4D5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 AP002414.1-201ENST00000391405 1147 ntBASIC18.8■□□□□ 0.6
NXF3Q9H4D5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 VN2R19P-201ENST00000442399 1052 ntBASIC18.8■□□□□ 0.6
NXF3Q9H4D5 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 AC007613.1-201ENST00000572811 2597 ntBASIC18.8■□□□□ 0.6
NXF3Q9H4D5 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
NXF3Q9H4D5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 AL590787.1-201ENST00000568856 1315 ntBASIC18.79■□□□□ 0.6
NXF3Q9H4D5 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 CRYGEP-201ENST00000412192 528 ntBASIC18.79■□□□□ 0.6
NXF3Q9H4D5 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
NXF3Q9H4D5 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 YBX2P1-201ENST00000394192 760 ntBASIC18.78■□□□□ 0.6
NXF3Q9H4D5 IGLL3P-201ENST00000412472 434 ntBASIC18.78■□□□□ 0.6
NXF3Q9H4D5 HCG4B-203ENST00000450128 991 ntBASIC18.78■□□□□ 0.6
NXF3Q9H4D5 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.78■□□□□ 0.6
NXF3Q9H4D5 AC018845.2-201ENST00000568326 409 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms