Protein–RNA interactions for Protein: Q9BS92

NIPSNAP3B, Protein NipSnap homolog 3B, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3BQ9BS92 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.03□□□□□ -0.16
NIPSNAP3BQ9BS92 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NIPSNAP3BQ9BS92 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 AC023824.1-201ENST00000562945 2975 ntBASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.02□□□□□ -0.16
NIPSNAP3BQ9BS92 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AC008550.1-201ENST00000511500 884 ntBASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 HLA-A-209ENST00000638375 975 ntBASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AL136379.1-201ENST00000623471 2642 ntBASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AC105917.1-201ENST00000506637 2539 ntBASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AC006449.5-201ENST00000610658 2098 ntBASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 AL513523.2-202ENST00000427283 2040 ntBASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NIPSNAP3BQ9BS92 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 RPS2P4-201ENST00000476944 856 ntBASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 TK2-204ENST00000525974 1178 ntTSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 AP001412.1-201ENST00000608405 714 ntBASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
NIPSNAP3BQ9BS92 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
NIPSNAP3BQ9BS92 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms