Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.97■□□□□ 0.31
CFAP54Q96N23 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 AC026150.2-201ENST00000564693 1156 ntBASIC16.96■□□□□ 0.31
CFAP54Q96N23 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 KLF4P1-201ENST00000412782 1185 ntBASIC16.96■□□□□ 0.31
CFAP54Q96N23 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 AC140912.1-201ENST00000577171 1054 ntBASIC16.96■□□□□ 0.31
CFAP54Q96N23 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.96■□□□□ 0.31
CFAP54Q96N23 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CFAP54Q96N23 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CFAP54Q96N23 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
CFAP54Q96N23 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
CFAP54Q96N23 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 AL353593.2-201ENST00000602529 1483 ntBASIC16.95■□□□□ 0.3
CFAP54Q96N23 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 AC140658.5-201ENST00000438532 169 ntBASIC16.95■□□□□ 0.3
CFAP54Q96N23 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.95■□□□□ 0.3
CFAP54Q96N23 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CFAP54Q96N23 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 AL353779.1-201ENST00000434793 351 ntBASIC16.94■□□□□ 0.3
CFAP54Q96N23 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 API5-211ENST00000534695 560 ntTSL 5 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
CFAP54Q96N23 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CFAP54Q96N23 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 AC241585.1-201ENST00000433527 519 ntBASIC16.93■□□□□ 0.3
CFAP54Q96N23 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms