Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 DRAXINP1-201ENST00000437611 948 ntBASIC17.79■□□□□ 0.44
RTP4Q96DX8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 AC132938.5-201ENST00000624980 1813 ntBASIC17.79■□□□□ 0.44
RTP4Q96DX8 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.79■□□□□ 0.44
RTP4Q96DX8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RTP4Q96DX8 AC233702.3-201ENST00000578656 1387 ntBASIC17.79■□□□□ 0.44
RTP4Q96DX8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 TSSC2-201ENST00000450217 709 ntBASIC17.78■□□□□ 0.44
RTP4Q96DX8 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 AL691432.3-201ENST00000621860 400 ntBASIC17.78■□□□□ 0.44
RTP4Q96DX8 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 EGFEM1P-202ENST00000431685 1563 ntBASIC17.78■□□□□ 0.44
RTP4Q96DX8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RTP4Q96DX8 AC105020.1-201ENST00000435356 2205 ntBASIC17.78■□□□□ 0.44
RTP4Q96DX8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RTP4Q96DX8 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTP4Q96DX8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTP4Q96DX8 AL135999.2-201ENST00000622438 1686 ntBASIC17.77■□□□□ 0.44
RTP4Q96DX8 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTP4Q96DX8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RTP4Q96DX8 AC003669.1-201ENST00000334569 611 ntBASIC17.77■□□□□ 0.44
RTP4Q96DX8 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 AC026396.1-201ENST00000419388 421 ntBASIC17.77■□□□□ 0.44
RTP4Q96DX8 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 AP002383.4-201ENST00000442518 975 ntBASIC17.77■□□□□ 0.44
RTP4Q96DX8 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 TPSP2-201ENST00000561760 610 ntBASIC17.77■□□□□ 0.44
RTP4Q96DX8 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 AC092329.2-201ENST00000598402 547 ntBASIC17.77■□□□□ 0.44
RTP4Q96DX8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RTP4Q96DX8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms