Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 RCN1P1-201ENST00000400413 996 ntBASIC18.42■□□□□ 0.54
RNF25Q96BH1 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.42■□□□□ 0.54
RNF25Q96BH1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF25Q96BH1 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF25Q96BH1 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 AC022616.7-201ENST00000525383 220 ntBASIC18.41■□□□□ 0.54
RNF25Q96BH1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF25Q96BH1 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF25Q96BH1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF25Q96BH1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
RNF25Q96BH1 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF25Q96BH1 AL671277.2-201ENST00000458060 996 ntBASIC18.4■□□□□ 0.54
RNF25Q96BH1 DUX4L26-201ENST00000489078 1255 ntBASIC18.4■□□□□ 0.54
RNF25Q96BH1 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF25Q96BH1 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
RNF25Q96BH1 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
RNF25Q96BH1 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF25Q96BH1 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF25Q96BH1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 LYSMD4-203ENST00000378904 2122 ntBASIC18.4■□□□□ 0.54
RNF25Q96BH1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF25Q96BH1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF25Q96BH1 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF25Q96BH1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF25Q96BH1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF25Q96BH1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 HMGB1P8-201ENST00000558211 949 ntBASIC18.39■□□□□ 0.53
RNF25Q96BH1 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF25Q96BH1 AL137246.1-201ENST00000607072 977 ntBASIC18.39■□□□□ 0.53
RNF25Q96BH1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms