Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.02■□□□□ 0.32
HIPK4Q8NE63 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.02■□□□□ 0.32
HIPK4Q8NE63 WWOX-216ENST00000569818 525 ntBASIC17.02■□□□□ 0.32
HIPK4Q8NE63 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.02■□□□□ 0.32
HIPK4Q8NE63 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.02■□□□□ 0.32
HIPK4Q8NE63 AL023803.3-201ENST00000615559 522 ntBASIC17.02■□□□□ 0.32
HIPK4Q8NE63 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HIPK4Q8NE63 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HIPK4Q8NE63 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 AL353719.1-201ENST00000566847 864 ntBASIC17.01■□□□□ 0.31
HIPK4Q8NE63 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 CR769767.2-201ENST00000622735 460 ntBASIC17.01■□□□□ 0.31
HIPK4Q8NE63 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIPK4Q8NE63 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17■□□□□ 0.31
HIPK4Q8NE63 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HIPK4Q8NE63 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
HIPK4Q8NE63 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17■□□□□ 0.31
HIPK4Q8NE63 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
HIPK4Q8NE63 AL603756.1-201ENST00000606511 2163 ntBASIC17■□□□□ 0.31
HIPK4Q8NE63 AC005915.1-201ENST00000624912 2018 ntBASIC17■□□□□ 0.31
HIPK4Q8NE63 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIPK4Q8NE63 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIPK4Q8NE63 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17■□□□□ 0.31
HIPK4Q8NE63 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HIPK4Q8NE63 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17■□□□□ 0.31
HIPK4Q8NE63 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
HIPK4Q8NE63 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms