Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SETD9Q8NE22 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SETD9Q8NE22 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.08■□□□□ 0.16
SETD9Q8NE22 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 AF186192.3-201ENST00000583427 947 ntBASIC16.07■□□□□ 0.16
SETD9Q8NE22 CR769767.2-201ENST00000622735 460 ntBASIC16.07■□□□□ 0.16
SETD9Q8NE22 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SETD9Q8NE22 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SETD9Q8NE22 AC068587.6-202ENST00000641839 5619 ntBASIC16.06■□□□□ 0.16
SETD9Q8NE22 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 MIR935-201ENST00000401179 91 ntBASIC16.06■□□□□ 0.16
SETD9Q8NE22 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SETD9Q8NE22 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.06■□□□□ 0.16
SETD9Q8NE22 AC078925.2-201ENST00000624013 1973 ntBASIC16.06■□□□□ 0.16
SETD9Q8NE22 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SETD9Q8NE22 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SETD9Q8NE22 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SETD9Q8NE22 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.05■□□□□ 0.16
SETD9Q8NE22 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SETD9Q8NE22 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.05■□□□□ 0.16
SETD9Q8NE22 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SETD9Q8NE22 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
SETD9Q8NE22 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SETD9Q8NE22 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SETD9Q8NE22 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.05■□□□□ 0.16
SETD9Q8NE22 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.05■□□□□ 0.16
SETD9Q8NE22 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.05■□□□□ 0.16
SETD9Q8NE22 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms