Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 AC007967.2-201ENST00000432613 625 ntBASIC18.95■□□□□ 0.62
VPS52Q8N1B4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 AC122714.2-201ENST00000502787 707 ntBASIC18.95■□□□□ 0.62
VPS52Q8N1B4 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 AC040169.1-201ENST00000565382 521 ntBASIC18.95■□□□□ 0.62
VPS52Q8N1B4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 AC004817.3-201ENST00000602957 2129 ntBASIC18.95■□□□□ 0.62
VPS52Q8N1B4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
VPS52Q8N1B4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 RPSAP43-201ENST00000402237 625 ntBASIC18.94■□□□□ 0.62
VPS52Q8N1B4 RNA5SP416-201ENST00000516838 111 ntBASIC18.94■□□□□ 0.62
VPS52Q8N1B4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 AC135776.1-201ENST00000319817 2481 ntBASIC18.94■□□□□ 0.62
VPS52Q8N1B4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.94■□□□□ 0.62
VPS52Q8N1B4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 YBX2P1-201ENST00000394192 760 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 GPX1P2-201ENST00000429271 606 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 AC009947.1-201ENST00000444350 727 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 AL139424.1-201ENST00000607572 797 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 MIR1199-201ENST00000621445 119 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 AD001527.2-201ENST00000622994 785 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 AC073592.4-201ENST00000623827 446 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC18.93■□□□□ 0.62
VPS52Q8N1B4 AC068880.1-201ENST00000507289 2297 ntBASIC18.93■□□□□ 0.62
VPS52Q8N1B4 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 MIR3687-2-201ENST00000577708 61 ntBASIC18.92■□□□□ 0.62
VPS52Q8N1B4 MIR3687-1-201ENST00000614492 61 ntBASIC18.92■□□□□ 0.62
VPS52Q8N1B4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
VPS52Q8N1B4 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms