Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 AC002558.1-201ENST00000488906 803 ntBASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 AC060834.1-201ENST00000443027 2032 ntBASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATP6AP1LQ52LC2 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 RHBDF1P1-201ENST00000427504 1941 ntBASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATP6AP1LQ52LC2 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP6AP1LQ52LC2 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP6AP1LQ52LC2 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATP6AP1LQ52LC2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 AC106886.4-201ENST00000623557 2502 ntBASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 TERF1P1-201ENST00000311003 1181 ntBASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 HOMER2P1-201ENST00000455653 964 ntBASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 AC005332.3-201ENST00000589904 676 ntBASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 AC133561.5-201ENST00000635547 218 ntBASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATP6AP1LQ52LC2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATP6AP1LQ52LC2 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms