Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AL135999.2-201ENST00000622438 1686 ntBASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PTPN20Q4JDL3 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 AC106795.1-205ENST00000512851 1056 ntBASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 AC091304.2-201ENST00000564639 760 ntBASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.36■□□□□ 0.53
PTPN20Q4JDL3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 SIGLEC16-201ENST00000599858 1437 ntBASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 AC073592.4-201ENST00000623827 446 ntBASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PTPN20Q4JDL3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 AC079776.2-201ENST00000641154 1609 ntBASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 AKR1C7P-201ENST00000305623 895 ntBASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 AL020989.1-201ENST00000422979 469 ntBASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 DUSP5P1-201ENST00000441325 1139 ntBASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PTPN20Q4JDL3 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms