Protein–RNA interactions for Protein: P46020

PHKA1, Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform, humanhuman

Predictions only

Length 1,223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1P46020 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PHKA1P46020 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.09■□□□□ 0.97
PHKA1P46020 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHKA1P46020 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PHKA1P46020 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHKA1P46020 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PHKA1P46020 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PHKA1P46020 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PHKA1P46020 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
PHKA1P46020 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
PHKA1P46020 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC21.08■□□□□ 0.97
PHKA1P46020 IGLL3P-201ENST00000412472 434 ntBASIC21.08■□□□□ 0.97
PHKA1P46020 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC21.08■□□□□ 0.97
PHKA1P46020 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.08■□□□□ 0.97
PHKA1P46020 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC21.08■□□□□ 0.97
PHKA1P46020 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.08■□□□□ 0.97
PHKA1P46020 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC21.08■□□□□ 0.97
PHKA1P46020 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.08■□□□□ 0.97
PHKA1P46020 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.08■□□□□ 0.96
PHKA1P46020 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHKA1P46020 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHKA1P46020 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHKA1P46020 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.08■□□□□ 0.96
PHKA1P46020 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PHKA1P46020 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC21.08■□□□□ 0.96
PHKA1P46020 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
PHKA1P46020 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHKA1P46020 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PHKA1P46020 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PHKA1P46020 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PHKA1P46020 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.07■□□□□ 0.96
PHKA1P46020 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHKA1P46020 GNE-204ENST00000539208 2190 ntTSL 2 BASIC21.07■□□□□ 0.96
PHKA1P46020 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC21.07■□□□□ 0.96
PHKA1P46020 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHKA1P46020 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHKA1P46020 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHKA1P46020 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.07■□□□□ 0.96
PHKA1P46020 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHKA1P46020 CRYGEP-201ENST00000412192 528 ntBASIC21.07■□□□□ 0.96
PHKA1P46020 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.07■□□□□ 0.96
PHKA1P46020 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC21.07■□□□□ 0.96
PHKA1P46020 AC018845.2-201ENST00000568326 409 ntBASIC21.07■□□□□ 0.96
PHKA1P46020 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PHKA1P46020 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHKA1P46020 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.07■□□□□ 0.96
PHKA1P46020 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PHKA1P46020 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PHKA1P46020 GATB-213ENST00000515812 1893 ntTSL 5 BASIC21.07■□□□□ 0.96
PHKA1P46020 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PHKA1P46020 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.06■□□□□ 0.96
PHKA1P46020 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
PHKA1P46020 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 PRSS29P-201ENST00000440800 595 ntBASIC21.06■□□□□ 0.96
PHKA1P46020 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC21.06■□□□□ 0.96
PHKA1P46020 AC040169.1-201ENST00000565382 521 ntBASIC21.06■□□□□ 0.96
PHKA1P46020 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PHKA1P46020 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
PHKA1P46020 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
PHKA1P46020 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
PHKA1P46020 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PHKA1P46020 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PHKA1P46020 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 YBX2P1-201ENST00000394192 760 ntBASIC21.05■□□□□ 0.96
PHKA1P46020 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PHKA1P46020 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PHKA1P46020 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC21.05■□□□□ 0.96
PHKA1P46020 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC21.05■□□□□ 0.96
PHKA1P46020 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.05■□□□□ 0.96
PHKA1P46020 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.05■□□□□ 0.96
PHKA1P46020 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.05■□□□□ 0.96
PHKA1P46020 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHKA1P46020 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.05■□□□□ 0.96
PHKA1P46020 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.04■□□□□ 0.96
PHKA1P46020 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHKA1P46020 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHKA1P46020 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms