Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ERCC2P18074 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.98■□□□□ 0.47
ERCC2P18074 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
ERCC2P18074 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ERCC2P18074 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ERCC2P18074 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ERCC2P18074 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ERCC2P18074 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
ERCC2P18074 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC2P18074 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC2P18074 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC2P18074 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.97■□□□□ 0.47
ERCC2P18074 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.97■□□□□ 0.47
ERCC2P18074 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.97■□□□□ 0.47
ERCC2P18074 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.97■□□□□ 0.47
ERCC2P18074 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC2P18074 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.97■□□□□ 0.47
ERCC2P18074 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
ERCC2P18074 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ERCC2P18074 AP005117.1-201ENST00000584346 1413 ntBASIC17.97■□□□□ 0.47
ERCC2P18074 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ERCC2P18074 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
ERCC2P18074 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC2P18074 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ERCC2P18074 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC2P18074 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ERCC2P18074 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.96■□□□□ 0.47
ERCC2P18074 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC2P18074 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC2P18074 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ERCC2P18074 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.96■□□□□ 0.47
ERCC2P18074 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ERCC2P18074 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ERCC2P18074 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.96■□□□□ 0.47
ERCC2P18074 OR6D1P-202ENST00000641007 5290 ntBASIC17.96■□□□□ 0.47
ERCC2P18074 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.46
ERCC2P18074 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
ERCC2P18074 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
ERCC2P18074 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.95■□□□□ 0.46
ERCC2P18074 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC2P18074 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.95■□□□□ 0.46
ERCC2P18074 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
ERCC2P18074 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.95■□□□□ 0.46
ERCC2P18074 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
ERCC2P18074 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.95■□□□□ 0.46
ERCC2P18074 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.95■□□□□ 0.46
ERCC2P18074 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.95■□□□□ 0.46
ERCC2P18074 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.95■□□□□ 0.46
ERCC2P18074 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.95■□□□□ 0.46
ERCC2P18074 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.95■□□□□ 0.46
ERCC2P18074 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ERCC2P18074 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms