Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 AC132938.5-201ENST00000624980 1813 ntBASIC14.43□□□□□ -0.1
CCL3L1P16619 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
CCL3L1P16619 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.43□□□□□ -0.1
CCL3L1P16619 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL3L1P16619 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL3L1P16619 AL139327.4-201ENST00000612362 153 ntBASIC14.43□□□□□ -0.1
CCL3L1P16619 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.43□□□□□ -0.1
CCL3L1P16619 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.43□□□□□ -0.1
CCL3L1P16619 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CCL3L1P16619 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CCL3L1P16619 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCL3L1P16619 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
CCL3L1P16619 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCL3L1P16619 BOC-212ENST00000485230 2173 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 AKR1C7P-201ENST00000305623 895 ntBASIC14.42□□□□□ -0.1
CCL3L1P16619 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCL3L1P16619 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 MYCLP1-201ENST00000372451 1075 ntBASIC14.42□□□□□ -0.1
CCL3L1P16619 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 KLF4P1-201ENST00000412782 1185 ntBASIC14.42□□□□□ -0.1
CCL3L1P16619 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.42□□□□□ -0.1
CCL3L1P16619 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.42□□□□□ -0.1
CCL3L1P16619 STK25P1-201ENST00000585406 838 ntBASIC14.42□□□□□ -0.1
CCL3L1P16619 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC14.42□□□□□ -0.1
CCL3L1P16619 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.42□□□□□ -0.1
CCL3L1P16619 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
CCL3L1P16619 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCL3L1P16619 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 PMPCAP1-201ENST00000508114 1576 ntBASIC14.42□□□□□ -0.1
CCL3L1P16619 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCL3L1P16619 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCL3L1P16619 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.42□□□□□ -0.1
CCL3L1P16619 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCL3L1P16619 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL3L1P16619 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms