Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 AC132872.4-202ENST00000622924 2756 ntBASIC16.52■□□□□ 0.24
MT-ND1P03886 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
MT-ND1P03886 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
MT-ND1P03886 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-ND1P03886 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
MT-ND1P03886 MMP23A-201ENST00000234610 1017 ntBASIC16.52■□□□□ 0.24
MT-ND1P03886 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
MT-ND1P03886 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
MT-ND1P03886 TSPY15P-201ENST00000457163 923 ntBASIC16.52■□□□□ 0.24
MT-ND1P03886 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.52■□□□□ 0.24
MT-ND1P03886 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
MT-ND1P03886 AC116407.2-201ENST00000613639 860 ntBASIC16.52■□□□□ 0.24
MT-ND1P03886 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.52■□□□□ 0.24
MT-ND1P03886 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
MT-ND1P03886 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND1P03886 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
MT-ND1P03886 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND1P03886 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND1P03886 KRT8P9-201ENST00000558927 1449 ntBASIC16.52■□□□□ 0.23
MT-ND1P03886 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND1P03886 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND1P03886 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND1P03886 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND1P03886 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
MT-ND1P03886 KRT8P47-201ENST00000604727 1398 ntBASIC16.51■□□□□ 0.23
MT-ND1P03886 RNF216P1-203ENST00000404404 2427 ntBASIC16.51■□□□□ 0.23
MT-ND1P03886 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND1P03886 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND1P03886 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.51■□□□□ 0.23
MT-ND1P03886 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND1P03886 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.51■□□□□ 0.23
MT-ND1P03886 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.51■□□□□ 0.23
MT-ND1P03886 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 SEC1P-202ENST00000473944 940 ntBASIC16.51■□□□□ 0.23
MT-ND1P03886 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MT-ND1P03886 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
MT-ND1P03886 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
MT-ND1P03886 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.51■□□□□ 0.23
MT-ND1P03886 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 AC011270.2-201ENST00000624293 2550 ntBASIC16.51■□□□□ 0.23
MT-ND1P03886 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND1P03886 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
MT-ND1P03886 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.51■□□□□ 0.23
MT-ND1P03886 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
MT-ND1P03886 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.51■□□□□ 0.23
MT-ND1P03886 AL662844.4-201ENST00000606367 2838 ntBASIC16.51■□□□□ 0.23
MT-ND1P03886 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-ND1P03886 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.5■□□□□ 0.23
MT-ND1P03886 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-ND1P03886 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MT-ND1P03886 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MT-ND1P03886 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
MT-ND1P03886 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
MT-ND1P03886 AC009947.2-201ENST00000444014 672 ntBASIC16.5■□□□□ 0.23
MT-ND1P03886 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.5■□□□□ 0.23
MT-ND1P03886 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.5■□□□□ 0.23
MT-ND1P03886 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MT-ND1P03886 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.5■□□□□ 0.23
MT-ND1P03886 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms