Protein–RNA interactions for Protein: O75096

LRP4, Low-density lipoprotein receptor-related protein 4, humanhuman

Predictions only

Length 1,905 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP4O75096 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.73■□□□□ 0.27
LRP4O75096 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.73■□□□□ 0.27
LRP4O75096 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRP4O75096 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.72■□□□□ 0.27
LRP4O75096 DUX4L17-201ENST00000557360 1267 ntBASIC16.72■□□□□ 0.27
LRP4O75096 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
LRP4O75096 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 MIR4469-201ENST00000583919 79 ntBASIC16.72■□□□□ 0.27
LRP4O75096 AL596442.2-201ENST00000610240 980 ntBASIC16.72■□□□□ 0.27
LRP4O75096 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.72■□□□□ 0.27
LRP4O75096 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.72■□□□□ 0.27
LRP4O75096 NOC2LP2-201ENST00000407594 1944 ntBASIC16.72■□□□□ 0.27
LRP4O75096 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
LRP4O75096 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.72■□□□□ 0.27
LRP4O75096 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.72■□□□□ 0.27
LRP4O75096 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC16.72■□□□□ 0.27
LRP4O75096 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.72■□□□□ 0.27
LRP4O75096 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.72■□□□□ 0.27
LRP4O75096 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.72■□□□□ 0.27
LRP4O75096 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
LRP4O75096 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.72■□□□□ 0.27
LRP4O75096 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
LRP4O75096 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.72■□□□□ 0.27
LRP4O75096 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
LRP4O75096 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRP4O75096 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRP4O75096 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.71■□□□□ 0.27
LRP4O75096 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.71■□□□□ 0.27
LRP4O75096 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.71■□□□□ 0.27
LRP4O75096 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
LRP4O75096 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.71■□□□□ 0.27
LRP4O75096 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.71■□□□□ 0.27
LRP4O75096 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.71■□□□□ 0.27
LRP4O75096 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.71■□□□□ 0.27
LRP4O75096 AC022145.2-201ENST00000598203 171 ntBASIC16.71■□□□□ 0.27
LRP4O75096 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRP4O75096 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.71■□□□□ 0.27
LRP4O75096 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 STOM-202ENST00000347359 870 ntTSL 2 BASIC16.7■□□□□ 0.26
LRP4O75096 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.7■□□□□ 0.26
LRP4O75096 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.7■□□□□ 0.26
LRP4O75096 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.7■□□□□ 0.26
LRP4O75096 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.7■□□□□ 0.26
LRP4O75096 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.7■□□□□ 0.26
LRP4O75096 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.7■□□□□ 0.26
LRP4O75096 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
LRP4O75096 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.7■□□□□ 0.26
LRP4O75096 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
LRP4O75096 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRP4O75096 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
LRP4O75096 AL135744.1-201ENST00000565098 629 ntBASIC16.7■□□□□ 0.26
LRP4O75096 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.7■□□□□ 0.26
LRP4O75096 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.7■□□□□ 0.26
LRP4O75096 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
LRP4O75096 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.7■□□□□ 0.26
LRP4O75096 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.7■□□□□ 0.26
LRP4O75096 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.69■□□□□ 0.26
LRP4O75096 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRP4O75096 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRP4O75096 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.69■□□□□ 0.26
LRP4O75096 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRP4O75096 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
LRP4O75096 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
LRP4O75096 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms