Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PRICKLE3O43900 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 AC064862.7-201ENST00000604520 867 ntBASIC16.76■□□□□ 0.27
PRICKLE3O43900 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PRICKLE3O43900 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PRICKLE3O43900 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 AF186996.4-201ENST00000467186 377 ntBASIC16.75■□□□□ 0.27
PRICKLE3O43900 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 AL589182.2-201ENST00000619332 1049 ntBASIC16.75■□□□□ 0.27
PRICKLE3O43900 AC107918.4-202ENST00000641623 219 ntBASIC16.75■□□□□ 0.27
PRICKLE3O43900 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
PRICKLE3O43900 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PRICKLE3O43900 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 AC016396.2-201ENST00000562575 1417 ntBASIC16.74■□□□□ 0.27
PRICKLE3O43900 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 RPS2P1-201ENST00000434010 821 ntBASIC16.74■□□□□ 0.27
PRICKLE3O43900 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 AL662844.1-201ENST00000546340 181 ntBASIC16.74■□□□□ 0.27
PRICKLE3O43900 GPALPP1-207ENST00000611650 899 ntBASIC16.74■□□□□ 0.27
PRICKLE3O43900 AL773604.1-201ENST00000617417 272 ntBASIC16.74■□□□□ 0.27
PRICKLE3O43900 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PRICKLE3O43900 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.74■□□□□ 0.27
PRICKLE3O43900 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PRICKLE3O43900 HLA-A-201ENST00000376802 1334 ntBASIC16.73■□□□□ 0.27
PRICKLE3O43900 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
PRICKLE3O43900 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms