Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
LDB2O43679 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 KLF4P1-201ENST00000412782 1185 ntBASIC17.46■□□□□ 0.39
LDB2O43679 ABCD1P5-201ENST00000445663 754 ntBASIC17.46■□□□□ 0.39
LDB2O43679 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.46■□□□□ 0.39
LDB2O43679 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.46■□□□□ 0.39
LDB2O43679 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.46■□□□□ 0.39
LDB2O43679 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 AL591684.3-201ENST00000605187 298 ntBASIC17.46■□□□□ 0.39
LDB2O43679 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.46■□□□□ 0.39
LDB2O43679 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
LDB2O43679 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
LDB2O43679 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
LDB2O43679 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
LDB2O43679 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LDB2O43679 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.45■□□□□ 0.38
LDB2O43679 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.45■□□□□ 0.38
LDB2O43679 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.45■□□□□ 0.38
LDB2O43679 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.45■□□□□ 0.38
LDB2O43679 KRT126P-201ENST00000549467 1181 ntBASIC17.45■□□□□ 0.38
LDB2O43679 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.45■□□□□ 0.38
LDB2O43679 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.45■□□□□ 0.38
LDB2O43679 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
LDB2O43679 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
LDB2O43679 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
LDB2O43679 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.44■□□□□ 0.38
LDB2O43679 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
LDB2O43679 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
LDB2O43679 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
LDB2O43679 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LDB2O43679 AL135999.2-201ENST00000622438 1686 ntBASIC17.44■□□□□ 0.38
LDB2O43679 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.44■□□□□ 0.38
LDB2O43679 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
LDB2O43679 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
LDB2O43679 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
LDB2O43679 AC148477.5-201ENST00000625164 1645 ntBASIC17.43■□□□□ 0.38
LDB2O43679 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.43■□□□□ 0.38
LDB2O43679 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.43■□□□□ 0.38
LDB2O43679 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.43■□□□□ 0.38
LDB2O43679 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LDB2O43679 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LDB2O43679 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.43■□□□□ 0.38
LDB2O43679 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms