Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.33□□□□□ -0.44
LINC01546A6NGU7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 AC098934.4-201ENST00000564127 592 ntBASIC12.33□□□□□ -0.44
LINC01546A6NGU7 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 AC233263.1-201ENST00000578059 224 ntBASIC12.33□□□□□ -0.44
LINC01546A6NGU7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 AL391256.1-201ENST00000443260 1855 ntBASIC12.33□□□□□ -0.44
LINC01546A6NGU7 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
LINC01546A6NGU7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 NCF1B-203ENST00000435988 1254 ntBASIC12.32□□□□□ -0.44
LINC01546A6NGU7 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 AC022517.1-201ENST00000592429 346 ntBASIC12.32□□□□□ -0.44
LINC01546A6NGU7 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 AC073195.1-201ENST00000607241 877 ntBASIC12.32□□□□□ -0.44
LINC01546A6NGU7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 ALOX12P2-203ENST00000570921 1945 ntBASIC12.32□□□□□ -0.44
LINC01546A6NGU7 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
LINC01546A6NGU7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
LINC01546A6NGU7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms