Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 AC093525.9-201ENST00000624961 1746 ntBASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 AC004817.3-201ENST00000602957 2129 ntBASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.42■□□□□ 0.7
BLOC1S4Q9NUP1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 AL020989.1-201ENST00000422979 469 ntBASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 UNC93B7-201ENST00000509439 705 ntBASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 AC091304.2-201ENST00000564639 760 ntBASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.41■□□□□ 0.7
BLOC1S4Q9NUP1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 DUSP5P1-201ENST00000441325 1139 ntBASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 REXO1L6P-202ENST00000619970 1078 ntBASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
BLOC1S4Q9NUP1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.39■□□□□ 0.7
BLOC1S4Q9NUP1 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
BLOC1S4Q9NUP1 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BLOC1S4Q9NUP1 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BLOC1S4Q9NUP1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
BLOC1S4Q9NUP1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BLOC1S4Q9NUP1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
BLOC1S4Q9NUP1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
BLOC1S4Q9NUP1 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BLOC1S4Q9NUP1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms