Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 AC132008.2-207ENST00000454517 770 ntBASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 AL691432.3-201ENST00000621860 400 ntBASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 AC133963.1-201ENST00000504166 1679 ntBASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 SIRPAP1-201ENST00000448467 1770 ntBASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SDHAF3Q9NRP4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 AC068880.1-201ENST00000507289 2297 ntBASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 AL133373.2-201ENST00000623187 2828 ntBASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 AD001527.2-201ENST00000622994 785 ntBASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 AC012313.10-201ENST00000623509 926 ntBASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
SDHAF3Q9NRP4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 AL353593.2-201ENST00000602529 1483 ntBASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 RBM17P3-201ENST00000417687 1192 ntBASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 AL450487.1-201ENST00000426799 995 ntBASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SDHAF3Q9NRP4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms