Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PCDHB16Q9NRJ7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 AC132938.6-201ENST00000623828 1655 ntBASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 DDX43P3-201ENST00000441064 443 ntBASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 CROCCP2-202ENST00000412962 2773 ntBASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 KRT89P-201ENST00000620027 1478 ntBASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.26■□□□□ 0.03
PCDHB16Q9NRJ7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 TSPY26P-202ENST00000565928 3884 ntBASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 CRAT-202ENST00000393384 973 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 HLA-J-201ENST00000462773 1622 ntBASIC15.25■□□□□ 0.03
PCDHB16Q9NRJ7 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 AL355312.1-201ENST00000407115 2176 ntBASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PCDHB16Q9NRJ7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms